If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 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'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ), 'gf_id' => 'HOM05D000602', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000602' ), 'data_identifier' => 'HOM05D000602', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000602', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '937', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01140' => 'bna', 'A03p05080' => 'bna', 'A03p32130' => 'bna', 'A06p36450' => 'bna', 'A07p00790' => 'bna', 'A07p28680' => 'bna', 'A09p10410' => 'bna', 'Aa31LG11G4890' => 'aar', 'Aa31LG3G12260' => 'aar', 'Aa31LG3G15530' => 'aar', 'Aa31LG4G80' => 'aar', 'Aa31LG5G420' => 'aar', 'Aa31LG8G11570' => 'aar', 'Aa31LG8G16880' => 'aar', 'Aa31LG8G16890' => 'aar', 'Aa31sc172G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.638' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2957' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.821' => 'aag', 'Actinidia05792' => 'ach', 'Actinidia09995' => 'ach', 'Actinidia14685' => 'ach', 'Actinidia15744' => 'ach', 'Actinidia21712' => 'ach', 'Actinidia30957' => 'ach', 'Actinidia32095' => 'ach', 'Actinidia38308' => 'ach', 'Ah.01g022060' => 'amhyb', 'Ah.05g176410' => 'amhyb', 'Ah.05g177580' => 'amhyb', 'Ah.05g177590' => 'amhyb', 'Ah.14g083280' => 'amhyb', 'AL2G41810' => 'aly', 'AL3G45400' => 'aly', 'AL3G48320' => 'aly', 'AL6G22390' => 'aly', 'AL6G37810' => 'aly', 'AL6G52860' => 'aly', 'Aqoxy3G02017' => 'aox', 'Aqoxy5G03954' => 'aox', 'Aqoxy7G00370' => 'aox', 'Aqoxy7G00872' => 'aox', 'Aqoxy7G01426' => 'aox', 'Aqoxy7G03871' => 'aox', 'Aqoxy7G03873' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0ZWX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1HFN7Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2V8AWM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2VC2GC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3UCL88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.44SR41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4G7KVK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5R2T74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6P9HVR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WN5RS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.70DEUR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7L9HTB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94RAPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9S7237' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A9D2UJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B57HAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C3F51K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CB8PQ8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EN2TM4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FQ1J4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G1MRC8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3614J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6USSJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HD4K12' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HLUA2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HSRM7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I325BF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I46CA4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2L1UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KEEV2U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LMJV4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LV7V5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7W292' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MID1KN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N43WCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NM7RU6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NMY9PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q0GMZ4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q65WP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QV18D6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R2Q3Y9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SM45K0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SND0H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUXH1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.THTJ31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TJ5X26' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U3SJP5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0YRFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1EQXE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VEA7DZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGSY7T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ9HCC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6CQQ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W9WT0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WA2SL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WKM53H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1S4JE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z8U9FX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLM6U3' => 'arhy', 'AT1G79750' => 'ath', 'AT2G13560' => 'ath', 'AT2G19900' => 'ath', 'AT4G00570' => 'ath', 'AT5G11670' => 'ath', 'AT5G25880' => 'ath', 'ATR0665G658' => 'atr', 'ATR0680G410' => 'atr', 'ATR0705G070' => 'atr', 'Atru.chr5.37' => 'acertr', 'Atru.chr5.443' => 'acertr', 'Atru.chr5.67' => 'acertr', 'Atru.chr7.1448' => 'acertr', 'Atru.chr7.2060' => 'acertr', 'AUR62004314' => 'cqu', 'AUR62009235' => 'cqu', 'AUR62010904' => 'cqu', 'AUR62013799' => 'cqu', 'AUR62021422' => 'cqu', 'AUR62022202' => 'cqu', 'AUR62023359' => 'cqu', 'AUR62023443' => 'cqu', 'AUR62031910' => 'cqu', 'AUR62033329' => 'cqu', 'AUR62033330' => 'cqu', 'AUR62036603' => 'cqu', 'AUR62041960' => 'cqu', 'BcaB01g02259' => 'bca', 'BcaB01g05469' => 'bca', 'BcaB02g07047' => 'bca', 'BcaB02g11521' => 'bca', 'BcaB03g16777' => 'bca', 'BcaC01g06869' => 'bca', 'BcaC02g11105' => 'bca', 'BcaC03g13385' => 'bca', 'BcaC04g23080' => 'bca', 'BcaC04g24160' => 'bca', 'BcaC06g36653' => 'bca', 'BcaC08g45548' => 'bca', 'BcaNung02662' => 'bca', 'BcaNung05356' => 'bca', 'BolC2t06480H' => 'bol', 'BolC3t13100H' => 'bol', 'BolC3t16186H' => 'bol', 'BolC4t23827H' => 'bol', 'BolC6t37536H' => 'bol', 'BolC6t37624H' => 'bol', 'BolC6t38351H' => 'bol', 'BolC7t40583H' => 'bol', 'BolC7t44735H' => 'bol', 'BolC9t52982H' => 'bol', 'BolC9t54128H' => 'bol', 'BraA02t05093Z' => 'bra', 'BraA03t09845Z' => 'bra', 'BraA03t12383Z' => 'bra', 'BraA03t15292Z' => 'bra', 'BraA06t26568Z' => 'bra', 'BraA07t27877Z' => 'bra', 'BraA07t30508Z' => 'bra', 'BraA09t35719Z' => 'bra', 'BraA09t36686Z' => 'bra', 'C02p05320' => 'bna', 'C02p57530' => 'bna', 'C03p05810' => 'bna', 'C03p39160' => 'bna', 'C04p20350' => 'bna', 'C04p23250' => 'bna', 'C06p23650' => 'bna', 'C06p23660' => 'bna', 'C06p24700' => 'bna', 'C06p32290' => 'bna', 'C07p01800' => 'bna', 'C07p42040' => 'bna', 'C09p12350' => 'bna', 'CAN.G1143.8' => 'can', 'CAN.G1143.9' => 'can', 'CAN.G1346.1' => 'can', 'CAN.G20.24' => 'can', 'CAN.G346.12' => 'can', 'CAN.G446.9' => 'can', 'CAN.G597.1' => 'can', 'CAN.G602.12' => 'can', 'CAN.G74.1' => 'can', 'CAN.G78.18' => 'can', 'CAN.G93.29' => 'can', 'CANSAT25G0055' => 'cansat', 'CANSAT25G0121' => 'cansat', 'CANSAT56G0553' => 'cansat', 'CANSAT56G2089' => 'cansat', 'CANSAT56G4356' => 'cansat', 'CANSAT80G2432' => 'cansat', 'CANSAT80G2849' => 'cansat', 'CARHR074690' => 'chi', 'CARHR104820' => 'chi', 'CARHR110330' => 'chi', 'CARHR187550' => 'chi', 'CARHR201550' => 'chi', 'CARHR248740' => 'chi', 'Carub.0002s2776' => 'cru', 'Carub.0003s2804' => 'cru', 'Carub.0003s3416' => 'cru', 'Carub.0006s1017' => 'cru', 'Carub.0006s2363' => 'cru', 'Carub.0006s3665' => 'cru', 'Ca_01162_v3' => 'car', 'Ca_07885_v3' => 'car', 'Ca_15575_v3' => 'car', 'Ca_17360_v3' => 'car', 'Ca_23144_v3' => 'car', 'Ca_23149_v3' => 'car', 'Ca_23260_v3' => 'car', 'Ca_23270_v3' => 'car', 'Ca_23726_v3' => 'car', 'Ca_23728_v3' => 'car', 'CBR_g17566' => 'cbr', 'CBR_g3078' => 'cbr', 'CBR_g3084' => 'cbr', 'CBR_g3085' => 'cbr', 'CBR_g3306' => 'cbr', 'CBR_g34906' => 'cbr', 'CBR_g41781' => 'cbr', 'CBR_g41782' => 'cbr', 'Cc00_g35700' => 'ccan', 'Cc02_g25700' => 'ccan', 'Cc02_g37470' => 'ccan', 'Cc04_g02590' => 'ccan', 'Cc06_g10370' => 'ccan', 'Cc08_g09860' => 'ccan', 'CDE04G1559' => 'cde', 'CDE05G0575' => 'cde', 'CDE05G3586' => 'cde', 'CDE11G0959' => 'cde', 'Cfa003190' => 'cfa', 'Cfa003960' => 'cfa', 'Cfa013384' => 'cfa', 'Cfa013418' => 'cfa', 'Cfa022157' => 'cfa', 'Cfa022159' => 'cfa', 'Cfa025434' => 'cfa', 'Ciclev10007668m.g' => 'ccl', 'Ciclev10007810m.g' => 'ccl', 'Ciclev10019380m.g' => 'ccl', 'Ciclev10024268m.g' => 'ccl', 'Ciclev10025125m.g' => 'ccl', 'CiPaw.01G056400' => 'cil', 'CiPaw.01G231800' => 'cil', 'CiPaw.02G146000' => 'cil', 'CiPaw.03G225900' => 'cil', 'CiPaw.07G202300' => 'cil', 'CiPaw.08G026900' => 'cil', 'CiPaw.13G020900' => 'cil', 'CiPaw.14G015200' => 'cil', 'ClCG00G003320' => 'cla', 'ClCG02G006110' => 'cla', 'ClCG03G016190' => 'cla', 'ClCG05G002840' => 'cla', 'ClCG06G000010' => 'cla', 'ClCG07G013300' => 'cla', 'ClCG08G012120' => 'cla', 'ClCG09G000150' => 'cla', 'COL.COLO4_12663' => 'col', 'COL.COLO4_19326' => 'col', 'COL.COLO4_20994' => 'col', 'COL.COLO4_30506' => 'col', 'COL.COLO4_34761' => 'col', 'Cpa.g.c41589' => 'cpa', 'Cpa.g.c43450' => 'cpa', 'Cpa.g.sc18.186' => 'cpa', 'Cpa.g.sc25.2' => 'cpa', 'Cpa.g.sc40.72' => 'cpa', 'Cpa.g.sc52.65' => 'cpa', 'Cpa.g.sc7.207' => 'cpa', 'Cre01.g022500' => 'cre', 'Cre06.g251400' => 'cre', 'Cre06.g268750' => 'cre', 'Cre14.g628650' => 'cre', 'Cre14.g629700' => 'cre', 'Cre14.g629750' => 'cre', 'CsaV3_1G039740' => 'csa', 'CsaV3_2G030720' => 'csa', 'CsaV3_3G010370' => 'csa', 'CsaV3_3G023610' => 'csa', 'CsaV3_3G025170' => 'csa', 'CsaV3_4G038010' => 'csa', 'CsaV3_6G005750' => 'csa', 'CsaV3_7G035320' => 'csa', 'CsaV3_UNG009100' => 'csa', 'CsaV3_UNG038210' => 'csa', 'CsaV3_UNG042230' => 'csa', 'CsaV3_UNG044280' => 'csa', 'CsaV3_UNG071590' => 'csa', 'CsaV3_UNG082630' => 'csa', 'CsaV3_UNG082650' => 'csa', 'CsaV3_UNG096730' => 'csa', 'CsaV3_UNG175370' => 'csa', 'CsaV3_UNG215460' => 'csa', 'CsaV3_UNG235410' => 'csa', 'CSS0000429' => 'camsi', 'CSS0002008' => 'camsi', 'CSS0004991' => 'camsi', 'CSS0007622' => 'camsi', 'CSS0007940' => 'camsi', 'CSS0010044' => 'camsi', 'CSS0015250' => 'camsi', 'CSS0020253' => 'camsi', 'CSS0020613' => 'camsi', 'CSS0021350' => 'camsi', 'CSS0022294' => 'camsi', 'CSS0023622' => 'camsi', 'CSS0024023' => 'camsi', 'CSS0024094' => 'camsi', 'CSS0024288' => 'camsi', 'CSS0025483' => 'camsi', 'CSS0026760' => 'camsi', 'CSS0028063' => 'camsi', 'CSS0030639' => 'camsi', 'CSS0033504' => 'camsi', 'CSS0036160' => 'camsi', 'CSS0036342' => 'camsi', 'CSS0036508' => 'camsi', 'CSS0037990' => 'camsi', 'CSS0038601' => 'camsi', 'CSS0038767' => 'camsi', 'CSS0040540' => 'camsi', 'CSS0042024' => 'camsi', 'CSS0044330' => 'camsi', 'CSS0048221' => 'camsi', 'CSS0048262' => 'camsi', 'CSS0048544' => 'camsi', 'CSS0049726' => 'camsi', 'CSS0049906' => 'camsi', 'DCAR_000763' => 'dca', 'DCAR_001499' => 'dca', 'DCAR_003075' => 'dca', 'DCAR_007584' => 'dca', 'DCAR_010470' => 'dca', 'DCAR_015776' => 'dca', 'DCAR_015950' => 'dca', 'DCAR_016189' => 'dca', 'DCAR_017380' => 'dca', 'DCAR_017381' => 'dca', 'DCAR_017973' => 'dca', 'DCAR_018235' => 'dca', 'DCAR_023079' => 'dca', 'DCAR_028671' => 'dca', 'Dinv23387' => 'din', 'Dinv27920' => 'din', 'Dinv30438' => 'din', 'Dinv32442' => 'din', 'Dinv32443' => 'din', 'Dinv36694' => 'din', 'Dinv37981' => 'din', 'Dinv43780' => 'din', 'Dinv44013' => 'din', 'Dinv44014' => 'din', 'Duzib106G0361' => 'dzi', 'Duzib128G0914' => 'dzi', 'Duzib133G0534' => 'dzi', 'Duzib133G1478' => 'dzi', 'Duzib138G1809' => 'dzi', 'Duzib150G0397' => 'dzi', 'Duzib150G1410' => 'dzi', 'Duzib160G0001' => 'dzi', 'Duzib168G0542' => 'dzi', 'Duzib168G0587' => 'dzi', 'Duzib187G0653' => 'dzi', 'Duzib235G0003' => 'dzi', 'Duzib268G0618' => 'dzi', 'ECA233G1254' => 'eca', 'ECA236G0545' => 'eca', 'ECA236G2278' => 'eca', 'ECA236G4524' => 'eca', 'ECA240G3358' => 'eca', 'ECA246G3643' => 'eca', 'ECA247G4112' => 'eca', 'ECA248G3723' => 'eca', 'EL10Ac1g00523' => 'bvu', 'EL10Ac1g00707' => 'bvu', 'EL10Ac2g03986' => 'bvu', 'EL10Ac8g18395' => 'bvu', 'EL10Ac9g21210' => 'bvu', 'Eucgr.C00609' => 'egr', 'Eucgr.C01003' => 'egr', 'Eucgr.C03762' => 'egr', 'Eucgr.D02251' => 'egr', 'Eucgr.E01713' => 'egr', 'Eucgr.F03074' => 'egr', 'Eucgr.J02940' => 'egr', 'Eucgr.L01765' => 'egr', 'FAN01G1378' => 'fan', 'FAN02G1753' => 'fan', 'FAN03G1294' => 'fan', 'FAN03G1717' => 'fan', 'FAN05G2908' => 'fan', 'FAN06G1738' => 'fan', 'FAN06G1931' => 'fan', 'FAN06G2657' => 'fan', 'FAN09G0383' => 'fan', 'FAN10G2205' => 'fan', 'FAN10G3070' => 'fan', 'FAN10G3281' => 'fan', 'FAN10G4318' => 'fan', 'FAN14G3563' => 'fan', 'FAN15G0374' => 'fan', 'FAN19G0149' => 'fan', 'FAN20G2879' => 'fan', 'FAN23G0932' => 'fan', 'FAN27G0064' => 'fan', 'FAN28G2067' => 'fan', 'FvH4_1g06000' => 'fve', 'FvH4_2g35330' => 'fve', 'FvH4_6g32330' => 'fve', 'FvH4_7g08630' => 'fve', 'FvH4_7g13590' => 'fve', 'Glyma.01G008500' => 'gma', 'Glyma.01G088850' => 'gma', 'Glyma.03G014600' => 'gma', 'Glyma.03G102900' => 'gma', 'Glyma.04G086300' => 'gma', 'Glyma.05G091000' => 'gma', 'Glyma.05G227400' => 'gma', 'Glyma.06G087800' => 'gma', 'Glyma.07G015732' => 'gma', 'Glyma.07G074700' => 'gma', 'Glyma.08G034267' => 'gma', 'Glyma.08G034333' => 'gma', 'Glyma.08G201200' => 'gma', 'Glyma.09G262900' => 'gma', 'Glyma.13G354900' => 'gma', 'Glyma.15G019300' => 'gma', 'Glyma.15G204400' => 'gma', 'Glyma.15G223650' => 'gma', 'Glyma.15G241700' => 'gma', 'Glyma.16G077800' => 'gma', 'Glyma.18G229300' => 'gma', 'Gohir.A02G117500' => 'ghi', 'Gohir.A05G045600' => 'ghi', 'Gohir.A05G334100' => 'ghi', 'Gohir.A06G091800' => 'ghi', 'Gohir.A07G008400' => 'ghi', 'Gohir.A07G022245' => 'ghi', 'Gohir.A07G143500' => 'ghi', 'Gohir.A10G065700' => 'ghi', 'Gohir.A11G082400' => 'ghi', 'Gohir.D01G141901' => 'ghi', 'Gohir.D02G177540' => 'ghi', 'Gohir.D02G177620' => 'ghi', 'Gohir.D03G049150' => 'ghi', 'Gohir.D03G058000' => 'ghi', 'Gohir.D03G108901' => 'ghi', 'Gohir.D04G065450' => 'ghi', 'Gohir.D04G072100' => 'ghi', 'Gohir.D04G084616' => 'ghi', 'Gohir.D05G047300' => 'ghi', 'Gohir.D05G312100' => 'ghi', 'Gohir.D06G090980' => 'ghi', 'Gohir.D06G091100' => 'ghi', 'Gohir.D06G129950' => 'ghi', 'Gohir.D07G008800' => 'ghi', 'Gohir.D07G025100' => 'ghi', 'Gohir.D07G149300' => 'ghi', 'Gohir.D07G190101' => 'ghi', 'Gohir.D08G120600' => 'ghi', 'Gohir.D10G067100' => 'ghi', 'Gohir.D10G119133' => 'ghi', 'Gohir.D10G162766' => 'ghi', 'Gohir.D11G091100' => 'ghi', 'Gohir.D11G223014' => 'ghi', 'Gohir.D11G253433' => 'ghi', 'Gohir.D13G164566' => 'ghi', 'Gorai.001G008900' => 'gra', 'Gorai.001G026200' => 'gra', 'Gorai.001G170700' => 'gra', 'Gorai.002G174900' => 'gra', 'Gorai.003G050500' => 'gra', 'Gorai.003G061800' => 'gra', 'Gorai.005G112300' => 'gra', 'Gorai.005G158700' => 'gra', 'Gorai.007G097100' => 'gra', 'Gorai.007G275000' => 'gra', 'Gorai.007G302600' => 'gra', 'Gorai.009G048600' => 'gra', 'Gorai.010G105100' => 'gra', 'Gorai.010G156900' => 'gra', 'Gorai.011G071400' => 'gra', 'Gorai.011G197700' => 'gra', 'Gorai.012G081300' => 'gra', 'Gorai.012G134000' => 'gra', 'GSVIVG01013039001' => 'vvi', 'GSVIVG01015311001' => 'vvi', 'GSVIVG01016997001' => 'vvi', 'GSVIVG01018377001' => 'vvi', 'GSVIVG01026824001' => 'vvi', 'GSVIVG01035291001' => 'vvi', 'HanXRQChr01g0017481' => 'han', 'HanXRQChr02g0032241' => 'han', 'HanXRQChr03g0093501' => 'han', 'HanXRQChr04g0095881' => 'han', 'HanXRQChr04g0099401' => 'han', 'HanXRQChr04g0099471' => 'han', 'HanXRQChr04g0121671' => 'han', 'HanXRQChr05g0144671' => 'han', 'HanXRQChr06g0168181' => 'han', 'HanXRQChr06g0168241' => 'han', 'HanXRQChr06g0169901' => 'han', 'HanXRQChr08g0234441' => 'han', 'HanXRQChr09g0275721' => 'han', 'HanXRQChr12g0358151' => 'han', 'HanXRQChr13g0402171' => 'han', 'HanXRQChr16g0509531' => 'han', 'Haze_02912' => 'cav', 'Haze_15462' => 'cav', 'Haze_15844' => 'cav', 'Haze_21908' => 'cav', 'Haze_21910' => 'cav', 'Haze_25817' => 'cav', 'Haze_26198' => 'cav', 'Haze_26437' => 'cav', 'Haze_26818' => 'cav', 'Haze_26902' => 'cav', 'Haze_27033' => 'cav', 'Haze_27425' => 'cav', 'Hma1.2p1_0021F.1_g014300' => 'hma', 'Hma1.2p1_0430F.1_g151440' => 'hma', 'Hma1.2p1_0571F.1_g180830' => 'hma', 'Hma1.2p1_1232F.1_g268860' => 'hma', 'HPP92_002420' => 'vpl', 'HPP92_002421' => 'vpl', 'HPP92_002427' => 'vpl', 'HPP92_006370' => 'vpl', 'HPP92_007691' => 'vpl', 'HPP92_007774' => 'vpl', 'HPP92_007803' => 'vpl', 'HPP92_024069' => 'vpl', 'HPP92_025667' => 'vpl', 'Hund00692' => 'sun', 'Hund03383' => 'sun', 'Hund07596' => 'sun', 'Hund12265' => 'sun', 'Hund16946' => 'sun', 'Hund19495' => 'sun', 'Hund23800' => 'sun', 'Hund26257' => 'sun', 'Hund27307' => 'sun', 'Hund28311' => 'sun', 'Hund28314' => 'sun', 'Lalb_Chr04g0262961' => 'lal', 'Lalb_Chr05g0223171' => 'lal', 'Lalb_Chr07g0195171' => 'lal', 'Lalb_Chr09g0331511' => 'lal', 'Lalb_Chr09g0331521' => 'lal', 'Lalb_Chr10g0097281' => 'lal', 'Lalb_Chr11g0064571' => 'lal', 'Lalb_Chr14g0373041' => 'lal', 'Lalb_Chr17g0339901' => 'lal', 'Lalb_Chr22g0351541' => 'lal', 'Lalb_Chr23g0269701' => 'lal', 'Lj1g0004588' => 'lja', 'Lj3g0003921' => 'lja', 'Lj3g0007096' => 'lja', 'Lj3g0017434' => 'lja', 'Lj3g0018490' => 'lja', 'Lj4g0015414' => 'lja', 'Lj5C53T8' => 'lonja', 'Lj7A517G44' => 'lonja', 'Lj7C517T3' => 'lonja', 'Lj7C552G9' => 'lonja', 'Lj7C663G6' => 'lonja', 'Lj7C698T18' => 'lonja', 'Lj8C569G5' => 'lonja', 'Lj9A549T53' => 'lonja', 'Lj9C579T5' => 'lonja', 'Lsat_1_v5_gn_0_4981' => 'lsa', 'Lsat_1_v5_gn_1_36941' => 'lsa', 'Lsat_1_v5_gn_2_108140' => 'lsa', 'Lsat_1_v5_gn_2_113161' => 'lsa', 'Lsat_1_v5_gn_3_135681' => 'lsa', 'Lsat_1_v5_gn_3_136701' => 'lsa', 'Lsat_1_v5_gn_3_2040' => 'lsa', 'Lsat_1_v5_gn_5_32561' => 'lsa', 'Lsat_1_v5_gn_5_86441' => 'lsa', 'Lsat_1_v5_gn_6_22920' => 'lsa', 'Lsat_1_v5_gn_6_63260' => 'lsa', 'Lsat_1_v5_gn_7_11641' => 'lsa', 'Lsat_1_v5_gn_7_5301' => 'lsa', 'Lsat_1_v5_gn_8_96880' => 'lsa', 'Lsat_1_v5_gn_9_36640' => 'lsa', 'Manes.01G260100' => 'mes', 'Manes.01G275200' => 'mes', 'Manes.04G133900' => 'mes', 'Manes.05G037900' => 'mes', 'Manes.05G059200' => 'mes', 'Manes.11G034000' => 'mes', 'Manes.16G073900' => 'mes', 'Manes.16G109900' => 'mes', 'Mapoly0003s0094' => 'mpo', 'Mapoly0024s0126' => 'mpo', 'Mapoly0051s0068' => 'mpo', 'Mapoly0080s0072' => 'mpo', 'Mapoly0169s0005' => 'mpo', 'MBI01_g10138_MAGBIO' => 'mbi', 'MBI04_g03332_MAGBIO' => 'mbi', 'MBI04_g08846_MAGBIO' => 'mbi', 'MBI04_g26783_MAGBIO' => 'mbi', 'MBI18_g09780_MAGBIO' => 'mbi', 'MCO01G483' => 'mco', 'MCO03G432' => 'mco', 'MCO07G348' => 'mco', 'MCO14G012' => 'mco', 'MD01G1052400' => 'mdo', 'MD01G1083300' => 'mdo', 'MD02G1064800' => 'mdo', 'MD02G1226700' => 'mdo', 'MD04G1101300' => 'mdo', 'MD07G1087300' => 'mdo', 'MD07G1129000' => 'mdo', 'MD08G1111500' => 'mdo', 'MD09G1203300' => 'mdo', 'MD15G1091000' => 'mdo', 'MD15G1190900' => 'mdo', 'MD15G1195500' => 'mdo', 'MD16G1010500' => 'mdo', 'MD17G1077700' => 'mdo', 'MD17G1097700' => 'mdo', 'MD17G1184200' => 'mdo', 'Medtr2g101040' => 'mtr', 'Medtr3g110330' => 'mtr', 'Medtr7g076650' => 'mtr', 'Medtr8g009500' => 'mtr', 'Medtr8g014390' => 'mtr', 'Medtr8g032040' => 'mtr', 'Medtr8g102620' => 'mtr', 'MELO3C006261.2' => 'cme', 'MELO3C011129.2' => 'cme', 'MELO3C013000.2' => 'cme', 'MELO3C015407.2' => 'cme', 'MELO3C018058.2' => 'cme', 'MELO3C022537.2' => 'cme', 'MELO3C024441.2' => 'cme', 'MELO3C033910.2' => 'cme', 'Migut.A00187' => 'egut', 'Migut.B01710' => 'egut', 'Migut.D00993' => 'egut', 'Migut.E01535' => 'egut', 'Migut.I00900' => 'egut', 'Migut.J01106' => 'egut', 'Migut.K00532' => 'egut', 'Migut.N00148' => 'egut', 'Migut.N01711' => 'egut', 'MSTRG.14028' => 'ama', 'MSTRG.1663' => 'ama', 'MSTRG.20809' => 'ama', 'MSTRG.26871' => 'ama', 'MSTRG.28130' => 'ama', 'MSTRG.4750' => 'ama', 'MSTRG.9488' => 'ama', 'Nitab4.5_0000239g0100' => 'nta', 'Nitab4.5_0000566g0130' => 'nta', 'Nitab4.5_0001132g0070' => 'nta', 'Nitab4.5_0001172g0100' => 'nta', 'Nitab4.5_0001251g0090' => 'nta', 'Nitab4.5_0001321g0020' => 'nta', 'Nitab4.5_0003616g0010' => 'nta', 'Nitab4.5_0004241g0030' => 'nta', 'Nitab4.5_0005319g0030' => 'nta', 'Nitab4.5_0005668g0040' => 'nta', 'Nitab4.5_0006467g0050' => 'nta', 'Nitab4.5_0006669g0030' => 'nta', 'Nitab4.5_0007716g0010' => 'nta', 'Nitab4.5_0008124g0030' => 'nta', 'Nitab4.5_0014983g0010' => 'nta', 'Nitab4.5_0029200g0010' => 'nta', 'Nn1g00627' => 'nnu', 'Nn1g01428' => 'nnu', 'Nn3g18201' => 'nnu', 'Nn6g33673' => 'nnu', 'Nn6g33674' => 'nnu', 'Nn6g35312' => 'nnu', 'Nn8g39083' => 'nnu', 'Oeu002897.2' => 'oeu', 'Oeu014685.1' => 'oeu', 'Oeu015265.1' => 'oeu', 'Oeu023609.1' => 'oeu', 'Oeu053167.1' => 'oeu', 'Oeu053173.1' => 'oeu', 'Oeu054042.1' => 'oeu', 'Oeu064187.1' => 'oeu', 'Os01g0188400' => 'osa', 'Os01g0723400' => 'osa', 'Os01g0743500' => 'osa', 'Os02g0665000' => 'osa', 'Os07g0496200' => 'osa', 'Os10g0503500' => 'osa', 'Peaxi162Scf00038g01036' => 'pax', 'Peaxi162Scf00075g01625' => 'pax', 'Peaxi162Scf00177g00121' => 'pax', 'Peaxi162Scf00397g00526' => 'pax', 'Peaxi162Scf00493g00436' => 'pax', 'Peaxi162Scf00665g00334' => 'pax', 'Peaxi162Scf00699g00008' => 'pax', 'PGR031G1373' => 'pgr', 'PGR031G1425' => 'pgr', 'PGR042G2983' => 'pgr', 'PGR102G1602' => 'pgr', 'PGR102G2784' => 'pgr', 'PGR102G2815' => 'pgr', 'PGR142G4444' => 'pgr', 'PGSC0003DMG400000360' => 'stu', 'PGSC0003DMG400002612' => 'stu', 'PGSC0003DMG400003238' => 'stu', 'PGSC0003DMG400017014' => 'stu', 'PGSC0003DMG400026456' => 'stu', 'PGSC0003DMG400030121' => 'stu', 'PGSC0003DMG400033874' => 'stu', 'PGSC0003DMG401000020' => 'stu', 'Phvul.002G309600' => 'pvu', 'Phvul.004G170800' => 'pvu', 'Phvul.005G166400' => 'pvu', 'Phvul.008G068700' => 'pvu', 'Phvul.009G111500' => 'pvu', 'Phvul.010G041000' => 'pvu', 'Phvul.010G094700' => 'pvu', 'Phvul.010G145500' => 'pvu', 'Potri.001G189700' => 'ptr', 'Potri.002G135300' => 'ptr', 'Potri.002G156000' => 'ptr', 'Potri.003G049300' => 'ptr', 'Potri.006G236500' => 'ptr', 'Potri.014G043700' => 'ptr', 'Potri.014G079900' => 'ptr', 'Potri.018G046600' => 'ptr', 'Potri.018G086700' => 'ptr', 'Pp3c11_26700' => 'ppa', 'Pp3c1_9600' => 'ppa', 'Pp3c3_3290' => 'ppa', 'Pp3c7_17220' => 'ppa', 'Pp3c7_5170' => 'ppa', 'PRCOL_00003953' => 'pco', 'PRCOL_00004368' => 'pco', 'PRCOL_00005984' => 'pco', 'PRCOL_00006865' => 'pco', 'Prupe.1G445400' => 'ppe', 'Prupe.2G114100' => 'ppe', 'Prupe.2G160000' => 'ppe', 'Prupe.2G160200' => 'ppe', 'Prupe.3G059400' => 'ppe', 'Prupe.7G221100' => 'ppe', 'Psat2g156240' => 'psa', 'Psat3g051520' => 'psa', 'Psat3g111680' => 'psa', 'Psat3g129880' => 'psa', 'Psat4g152880' => 'psa', 'Psat4g218960' => 'psa', 'Psat4g220760' => 'psa', 'Psat5g020560' => 'psa', 'Psat5g087160' => 'psa', 'Psat5g296040' => 'psa', 'Psat6g215280' => 'psa', 'Psat7g017280' => 'psa', 'PSO013G0038' => 'pso', 'PSO210G6755' => 'pso', 'PSO210G7780' => 'pso', 'PSO478G4088' => 'pso', 'PSO507G0034' => 'pso', 'PSO675G0547' => 'pso', 'PSO717G0095' => 'pso', 'PSO729G0186' => 'pso', 'PSO729G0198' => 'pso', 'PSO782G2006' => 'pso', 'PSO782G5304' => 'pso', 'PSO832G1115' => 'pso', 'QL02p042020' => 'qlo', 'QL04p025913' => 'qlo', 'QL05p020165' => 'qlo', 'QL08p049812' => 'qlo', 'QL10p037945' => 'qlo', 'QL12p041056' => 'qlo', 'RcHm_v2.0_Chr1g0343641' => 'rch', 'RcHm_v2.0_Chr1g0353381' => 'rch', 'RcHm_v2.0_Chr2g0091741' => 'rch', 'RcHm_v2.0_Chr2g0140441' => 'rch', 'RcHm_v2.0_Chr3g0450811' => 'rch', 'RcHm_v2.0_Chr6g0306591' => 'rch', 'Rhsim03G0237400' => 'rsi', 'Rhsim05G0040800' => 'rsi', 'Rhsim07G0018800' => 'rsi', 'Rhsim07G0039600' => 'rsi', 'Rhsim07G0145700' => 'rsi', 'Rhsim12G0203000' => 'rsi', 'Sabra02G0105100' => 'sbr', 'Sabra02G0123900' => 'sbr', 'Sabra06G0184900' => 'sbr', 'Sabra14G0031600' => 'sbr', 'Sabra14G0058100' => 'sbr', 'Sabra18G0075000' => 'sbr', 'SalBow1G4284' => 'sbo', 'SalBow4G2091' => 'sbo', 'SalBow6G5856' => 'sbo', 'SalBow7G0756' => 'sbo', 'Sc06g0000860' => 'sci', 'Sc15g0002100' => 'sci', 'Sc18g0001430' => 'sci', 'Sc23g0003100' => 'sci', 'Sc23g0004540' => 'sci', 'Sed0002092' => 'sed', 'Sed0003174' => 'sed', 'Sed0008532' => 'sed', 'Sed0013968' => 'sed', 'Sed0015539' => 'sed', 'Sed0018941' => 'sed', 'Sed0021252' => 'sed', 'Sed0021943' => 'sed', 'Sed0024527' => 'sed', 'Sed0025140' => 'sed', 'SEGI_12192' => 'sgi', 'SEGI_12361' => 'sgi', 'SEGI_15608' => 'sgi', 'SEGI_19453' => 'sgi', 'SEGI_21041' => 'sgi', 'SEGI_24236' => 'sgi', 'SEGI_29620' => 'sgi', 'SEGI_33219' => 'sgi', 'SGA_v2.0_scaffold103G30031' => 'sas', 'SGA_v2.0_scaffold10G05162' => 'sas', 'SGA_v2.0_scaffold115G32164' => 'sas', 'SGA_v2.0_scaffold186G40172' => 'sas', 'SGA_v2.0_scaffold277G46677' => 'sas', 'SGA_v2.0_scaffold4G02025' => 'sas', 'SGA_v2.0_scaffold66G22534' => 'sas', 'SGA_v2.0_scaffold77G25246' => 'sas', 'SGA_v2.0_scaffold95G28728' => 'sas', 'SHI18793' => 'shi', 'SMO169G0156' => 'smo', 'SMO212G0001' => 'smo', 'SMO352G0003' => 'smo', 'SMO358G0721' => 'smo', 'Solyc01g094200.4' => 'sly', 'Solyc03g120990.3' => 'sly', 'Solyc05g050120.3' => 'sly', 'Solyc08g013860.3' => 'sly', 'Solyc08g066360.3' => 'sly', 'Solyc12g044600.3' => 'sly', 'Sopen01g038000' => 'spe', 'Sopen03g039820' => 'spe', 'Sopen05g028500' => 'spe', 'Sopen08g004720' => 'spe', 'Sopen08g020180' => 'spe', 'Sopen12g003380' => 'spe', 'Sopen12g023110' => 'spe', 'Sp2g21770' => 'spa', 'Sp3g26970' => 'spa', 'Sp3g33230' => 'spa', 'Sp5g36030' => 'spa', 'Sp6g00610' => 'spa', 'Sp6g31940' => 'spa', 'SpUn0347_0010' => 'spa', 'TAR374G0975' => 'tar', 'TAR375G0311' => 'tar', 'TAR383G1050' => 'tar', 'TAR624G0167' => 'tar', 'TAR626G0524' => 'tar', 'TAR636G0121' => 'tar', 'TAR636G3599' => 'tar', 'THA.LOC104800411' => 'tha', 'THA.LOC104801455' => 'tha', 'THA.LOC104804006' => 'tha', 'THA.LOC104811264' => 'tha', 'THA.LOC104813545' => 'tha', 'THA.LOC104813548' => 'tha', 'THA.LOC104817017' => 'tha', 'THA.LOC104821820' => 'tha', 'Thecc.01G365100' => 'tca', 'Thecc.06G099400' => 'tca', 'Thecc.09G047400' => 'tca', 'Thecc.09G101700' => 'tca', 'Thecc.10G002100' => 'tca', 'Thhalv10001940m.g' => 'esa', 'Thhalv10003882m.g' => 'esa', 'Thhalv10013057m.g' => 'esa', 'Thhalv10018247m.g' => 'esa', 'Thhalv10022600m.g' => 'esa', 'Thhalv10028520m.g' => 'esa', 'TPR.G12462' => 'tpr', 'TPR.G14390' => 'tpr', 'TPR.G17370' => 'tpr', 'TPR.G22745' => 'tpr', 'TPR.G23449' => 'tpr', 'TPR.G23460' => 'tpr', 'TPR.G25973' => 'tpr', 'TPR.G3935' => 'tpr', 'TPR.G6519' => 'tpr', 'TPR.G703' => 'tpr', 'TPR.G9812' => 'tpr', 'TWI18G1327' => 'twi', 'TWI23G0661' => 'twi', 'TWI23G0920' => 'twi', 'TWI23G1023' => 'twi', 'TWI34G0414' => 'twi', 'TWI34G0891' => 'twi', 'TWI59G0725' => 'twi', 'TWI63G0734' => 'twi', 'TWI75G1849' => 'twi', 'unitig_0.g1279' => 'ugi', 'unitig_26.g8969' => 'ugi', 'unitig_32.g11027' => 'ugi', 'unitig_8.g3324' => 'ugi', 'vmacro05266' => 'vma', 'vmacro06245' => 'vma', 'vmacro10855' => 'vma', 'vmacro13318' => 'vma', 'vmacro13534' => 'vma', 'vmacro17015' => 'vma', 'VMungo0251G1531' => 'vmu', 'VMungo0331G0435' => 'vmu', 'VMungo0331G0630' => 'vmu', 'VMungo0331G1326' => 'vmu', 'VMungo0331G1580' => 'vmu', 'VMungo0331G1824' => 'vmu', 'VMungo0464G0814' => 'vmu', 'VMungo1080G0884' => 'vmu', 'VMungo1309G1185' => 'vmu', 'VMungo1383G3458' => 'vmu', 'Zm00001eb059410' => 'zma', 'Zm00001eb121470' => 'zma', 'Zm00001eb137080' => 'zma', 'Zm00001eb143650' => 'zma', 'Zm00001eb154490' => 'zma', 'Zm00001eb220780' => 'zma', 'Zm00001eb283570' => 'zma', 'Zm00001eb285890' => 'zma', 'Zm00001eb321980' => 'zma', 'Zm00001eb349990' => 'zma', 'Zm00001eb371140' => 'zma' ) $gf_id = 'HOM05D000602' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000602' ) $data_identifier = 'HOM05D000602' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 9, 'aag' => (int) 3, 'ach' => (int) 8, 'amhyb' => (int) 5, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 59, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 5, 'cqu' => (int) 13, 'bca' => (int) 14, 'bol' => (int) 11, 'bra' => (int) 9, 'can' => (int) 11, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 8, 'ccan' => (int) 6, 'cde' => (int) 4, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 8, 'cla' => (int) 8, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 6, 'csa' => (int) 19, 'camsi' => (int) 34, 'dca' => (int) 14, 'din' => (int) 10, 'dzi' => (int) 13, 'eca' => (int) 8, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 20, 'fve' => (int) 5, 'gma' => (int) 21, 'ghi' => (int) 35, 'gra' => (int) 18, 'vvi' => (int) 6, 'han' => (int) 16, 'cav' => (int) 12, 'hma' => (int) 4, 'vpl' => (int) 9, 'sun' => (int) 11, 'lal' => (int) 11, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 8, 'mpo' => (int) 5, 'mbi' => (int) 5, 'mco' => (int) 4, 'mdo' => (int) 16, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 9, 'ama' => (int) 7, 'nta' => (int) 16, 'nnu' => (int) 7, 'oeu' => (int) 8, 'osa' => (int) 6, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 8, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 5, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 12, 'pso' => (int) 12, 'qlo' => (int) 6, 'rch' => (int) 6, 'rsi' => (int) 6, 'sbr' => (int) 6, 'sbo' => (int) 4, 'sci' => (int) 5, 'sed' => (int) 10, 'sgi' => (int) 8, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 6, 'spe' => (int) 7, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 8, 'tca' => (int) 5, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371140' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1